Index

_

__getitem__() (immunopheno.data_processing.ImmunoPhenoData method)

C

convert_labels() (immunopheno.data_processing.ImmunoPhenoData method)

D

db_stats() (immunopheno.connect.ImmunoPhenoDB_Connect method)

F

filter_labels() (immunopheno.connect.ImmunoPhenoDB_Connect method) find_antibodies() (immunopheno.connect.ImmunoPhenoDB_Connect method) find_celltypes() (immunopheno.connect.ImmunoPhenoDB_Connect method)

find_experiments() (immunopheno.connect.ImmunoPhenoDB_Connect method) fit_all_antibodies() (immunopheno.data_processing.ImmunoPhenoData method) fit_antibody() (immunopheno.data_processing.ImmunoPhenoData method) fits (immunopheno.data_processing.ImmunoPhenoData property)

I

ImmunoPhenoData (class in immunopheno.data_processing)

ImmunoPhenoDB_Connect (class in immunopheno.connect) imputed_reference (immunopheno.connect.ImmunoPhenoDB_Connect attribute)

L

labels (immunopheno.data_processing.ImmunoPhenoData property)

N

normalize_all_antibodies() (immunopheno.data_processing.ImmunoPhenoData method)

normalized_counts (immunopheno.data_processing.ImmunoPhenoData property)

P

plot_antibody_correlation() (in module immunopheno.plots) plot_db_graph() (immunopheno.connect.ImmunoPhenoDB_Connect method)

plot_UMAP() (in module immunopheno.plots) protein (immunopheno.data_processing.ImmunoPhenoData property)

R

remove_antibody() (immunopheno.data_processing.ImmunoPhenoData method)

rna (immunopheno.data_processing.ImmunoPhenoData property) run_stvea() (immunopheno.connect.ImmunoPhenoDB_Connect method)

S

select_mixture_model() (immunopheno.data_processing.ImmunoPhenoData method)

T

transfer_matrix (immunopheno.connect.ImmunoPhenoDB_Connect attribute)

U

url (immunopheno.connect.ImmunoPhenoDB_Connect attribute)

W

which_antibodies() (immunopheno.connect.ImmunoPhenoDB_Connect method)

which_celltypes() (immunopheno.connect.ImmunoPhenoDB_Connect method) which_experiments() (immunopheno.connect.ImmunoPhenoDB_Connect method)